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Additional file 16 of Identification of African swine fever virus-like elements in the soft tick genome provides insights into the virus’ evolution

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DataCite Commons2020-10-09 更新2024-07-28 收录
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Additional file 16: Table S10. O. moubata piRNA ping-pong signature analysed by PingPongPro v1.0 with default parameters and -b option (creates additional browser track files, which are suitable for display in common genome browsers). The closer the Score-value (1 minus the FDR-value: estimated fraction of signatures that have the same combination of properties, but that are not true ping-pong signatures) which is calculated from adenine bias at pos. 10 of the piRNA, stack height - e.g. the number of reads that make up the stack and independence of local coverage is to 1, the more likely is a true ping-pong signature.

附加文件16:表S10。针对O. moubata的piwi相互作用RNA(piwi-interacting RNA,piRNA)乒乓特征,采用默认参数及-b选项(该选项可生成适用于常见基因组浏览器展示的额外浏览器轨迹文件),通过PingPongPro v1.0完成分析。该评分值(1减去错误发现率(False Discovery Rate,FDR)值:即具有相同特征组合但并非真实乒乓特征的预估占比)由piRNA第10位的腺嘌呤偏好性、堆叠高度——即构成该堆叠的测序读段数——以及局部覆盖度独立性计算得到;该值越趋近于1,则其为真实piRNA乒乓特征的可能性越高。
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2020-10-09
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