Additional file 1: of Genomic insights into potential interdependencies in microbial hydrocarbon and nutrient cycling in hydrothermal sediments

Supplementary Tables S1-S5 and Figures S1-S10. Tables S3 and S4 are provided separately. Table S3. Summary statistics of assembled archaeal and bacterial MAGs. Metagenome-assembled genomes (MAGs) assembled from dive 4484 and 4572. Providing information about the taxonomic affiliation (ribosomal protein phylogeny), completeness (CheckM) and genome statistics. The completeness lists the CheckM results, including the number of evaluated markers, the number of times a marker was found within a respective genome (numbers ranging from 0 to 5+) and the degrees of completeness, contamination, and heterogeneity. Summary statistics include the GC content (%), genome length (Mb), average coverage (based on read coverage of the individual contigs), number of called genes and average gene length (bp). Table S4. Functional analysis of assembled archaeal and bacterial MAGs. Functional gene analysis of individual archaeal and bacterial MAGs recovered from dive 4484 and 4572 based on HMMER, KAAS, JGI/M, and blastp analyses of marker genes for specific pathways involved in carbon (C), nitrogen (N), and sulfur (S) cycling as well as several additional pathways. Presence/absence of genes are listed as: Presence: >1 (red), Absence: 0 (no color). (ZIP 2404 kb)

本数据集包含补充表格S1至S5及补充图S1至S10，其中表格S3与S4单独提供。
表格S3：组装古菌与细菌宏基因组组装基因组（Metagenome-assembled genomes，MAGs）汇总统计。本表格涉及从下潜航次4484与4572中组装得到的宏基因组组装基因组（MAGs），涵盖的信息包括分类学归属（基于核糖体蛋白系统发育分析）、完整度（通过CheckM评估）及基因组统计特征。完整度项包含CheckM的分析结果：评估的标记基因总数、单基因组中检测到的标记基因次数（取值范围为0至5+），以及完整度、污染度与异质性水平。汇总统计指标涵盖GC含量（%）、基因组长度（Mb）、平均覆盖度（基于各重叠群的测序读段覆盖度）、预测基因数量及平均基因长度（bp）。
表格S4：组装古菌与细菌宏基因组组装基因组的功能分析。本表格针对从下潜航次4484与4572中获得的古菌及细菌MAGs，基于HMMER、KAAS、JGI/M与blastp分析，对碳（C）、氮（N）、硫（S）循环相关特异性通路及其他若干通路的标记基因开展功能基因注释分析。基因的存在/缺失情况标注规则为：存在：>1（红色标记），缺失：0（无颜色标记）。
（压缩包大小：2404 kb）