Recording of 19,000 neurons across mouse visual cortex during sparse noise stimuli
收藏DataCite Commons2020-08-26 更新2024-08-17 收录
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https://figshare.com/articles/Recording_of_19_000_neurons_across_mouse_visual_cortex_during_sparse_noise_stimuli/9505250/1
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资源简介:
This repository contains the activity of 18,975 neurons across visual cortex during the presentation of sparse noise visual stimuli.<br>The deconvolved data is in the "spks.npy". "F.npy", "Fneu.npy", "stat.npy" and "ops.npy" are documented on the suite2p page: https://github.com/MouseLand/suite2p/wiki/Outputs<br>The frames of the sparse noise stimuli are in "mov.npy". The frame times are in "iframe.npy".<br>The behavioral data (already aligned to the neural frames) is in "cam1_TX39_2019_05_31_1_proc_resampled.npy". A subsampled subset of frames is in "cam1_TX39_20hz.avi".<br>For an example of how to load the data, align it to the image stimuli, compute receptive fields and predict from behavior, see this notebook: https://github.com/MouseLand/rastermap/blob/master/tutorial/tutorial.ipynb
本数据集仓库收录了视觉皮层(visual cortex)内18975个神经元在接收稀疏噪声视觉刺激时的神经活动数据。
反卷积处理后的神经活动数据存储于"spks.npy"文件中。"F.npy"、"Fneu.npy"、"stat.npy"及"ops.npy"的详细说明可参考suite2p官方输出文档页面:https://github.com/MouseLand/suite2p/wiki/Outputs
稀疏噪声视觉刺激的帧序列存储于"mov.npy"文件内,各帧的时间戳信息则存储于"iframe.npy"文件中。
已与神经成像帧完成对齐的行为数据存储于"cam1_TX39_2019_05_31_1_proc_resampled.npy"文件内。该数据集的经下采样处理的帧子集视频存储于"cam1_TX39_20hz.avi"文件中。
若需了解如何加载数据、将其与视觉刺激帧对齐、计算神经元感受野(receptive field)以及基于行为数据进行预测的示例代码,可参考该Jupyter Notebook:https://github.com/MouseLand/rastermap/blob/master/tutorial/tutorial.ipynb
提供机构:
figshare
创建时间:
2019-08-12



