首页/数据集/Genome-wide maps of polyadenylation sites in OPMD-model and control mice

Genome-wide maps of polyadenylation sites in OPMD-model and control mice

ChEBI2012-04-15 更新2026-07-21 收录

多聚腺苷酸化位点图谱

疾病模型基因组学

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-32302 数据链接链接失效反馈

官方服务：

资源简介：

Genome-wide maps of polyadenylation sites in OPMD-model and control mice

应用场景：

创建时间：

2012-04-15

相关数据集

PolyA sites determined using 3′ RACE.

多聚腺苷酸化位点图谱

转录后调控

aLength in nucleotides. Determined from the most common polyA site. The parenthesis shows alternative polyA sites.bLength in nucleotides. The parenthesis shows results from individual experimental rep

Figshare2015-12-02 更新90

Additional file 2: Figure S1. of GEP analysis validates high risk MDS and acute myeloid leukemia post MDS mice models and highlights novel dysregulated pathways

疾病模型基因组学

通路富集分析

GSEA analysis, (A) Endplot of significantly dysregulated pathways in HR-MDS vs FVB/N, (B) Endplot of significantly dysregulated pathways in AML post MDS vs FVB/N (ZIP 5853 kb)

NIAID Data Ecosystem60

LncRNA sequencing data

LncRNA表达分析

疾病模型基因组学

RNA sequencing data in mouse AF model and control.

Mendeley Data50

Additional file 2 of SCAPTURE: a deep learning-embedded pipeline that captures polyadenylation information from 3′ tag-based RNA-seq of single cells

多聚腺苷酸化位点图谱

单细胞RNA测序

Additional file 2: Table S1. List of collected known PASs. The known PASs in at least two of three (PolyA_DB3, PolyA-Seq or PolySite 2.0) databases or in the GENCODE (v35) annotation were labeled. And

Figshare2021-08-11 更新60

Example input for MAPP workflow

RNA结合蛋白

多聚腺苷酸化位点图谱

Small test dataset for MAPP workflow: 5mln reads sampled from two paired-end RNA-seq samples of the GEO record: GSE69656 100 arbitrarily chosen Position Weight Matrices for RNA binding proteins

NIAID Data Ecosystem50