Trait hypervolumes based on natural history collections can detect ecological strategies that are distinct to biogeographic regions
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<strong>specimen_localities_for_mapping_trait_hypervolumes.csv</strong> Point localities of specimens held in natural history collections for a random sample of 575 angiosperm species that all occur in the continent of Africa. Some of the localities were georeferenced as part of this research. Localities were spatially disaggregated using the R package <em>ecospat</em> prior to use in Species Distribution Models that were then used to spatially project biodiversity metrics. Fields: 1. Source How the specimen locality data was obtained: <strong>GBIF</strong> = from the Global Biodiversity Information Facility, <strong>TROPICOS </strong>= from Tropicos.org. Missouri Botanical Garden, <strong>Taxonomic_literature</strong> = specimens cited in published taxonomic literature, <strong>Kew_herbarium </strong>= specimens seen by authors in the herbarium of the Royal Botanic Gardens, Kew, London. <strong>RAINBIO =</strong> RAINBIO species checklist of tropical African vascular plants, <strong>LMA_herbarium</strong> = specimens seen by authors in the herbarium of the Agricultural Research Institute of Mozambique, Maputo, Mozambique, <strong>Kitwe_herbarium</strong> = specimens seen by authors in the herbarium of the Division of Forest Research Forestry Department, Kitwe, Zambia, <strong>Edinburgh_herbarium</strong> = specimens seen by authors in the herbarium of the Royal Botanic Garden Edinburgh, <strong>Windhoek_herbarium</strong> = specimens seen by authors in the herbarium of the National Herbarium of Namibia, <strong>UPS_herbarium </strong>= specimens seen by authors in the herbarium of the Museum of Evolution, Uppsala, Sweden. 2. Identitiy_number Identity number applied by GBIF to the specimen record 3. scientificName Binomial species name 4. Country Country in which the specimen was made 5. locality Textual description of the locality in which the specimen was made 6. habitat Textual description of the habitat in which the specimen was made 7. day Day of the month on which the specimen was made 8. month Month of the year on which the specimen was made 9. year Year in which the specimen was made 10. recordedBy Person or people who made the specimen 11. rec.Number Number given by collector to collection 12. Error.Diam. Spatial error of georefencing (km) 13. Min_Elev.M. Minimum altitude (m) 14. Max_Elev.M. Maximum altitude (m) 15. decimalLatitude Coordinates of latitude 16. decimalLongitude Coordinates of longitude 17. Label..notes Additional information recorded about the location of specimen collection 18. Georeferenced Whether each specimen record was (1) or was not (0) georeferenced (i.e. coordinates inferred from a textual description of locality) during this research <br> <strong>taxonomic_references_from_which_trait_values_obtained.docx</strong> Taxonomic publications from which trait values were extracted.
**specimen_localities_for_mapping_trait_hypervolumes.csv**
本数据集收录了自然历史馆藏标本的采样点坐标,涵盖随机选取的、均分布于非洲大陆的575种被子植物(angiosperm)。部分采集点的地理坐标是在本研究中完成地理配准的。在将采集点输入物种分布模型(Species Distribution Model)之前,研究人员已通过R语言包*ecospat*对采集点进行空间拆分,后续该模型被用于空间推演生物多样性指标。
字段说明:
1. **Source**:标本采集点数据的获取渠道,具体如下:
- **GBIF**:来自全球生物多样性信息设施(Global Biodiversity Information Facility)
- **TROPICOS**:来自密苏里植物园Tropicos.org数据库
- **Taxonomic_literature**:来自已发表分类学文献中引用的标本
- **Kew_herbarium**:研究人员在英国伦敦皇家植物园邱园标本馆观测到的标本
- **RAINBIO**:热带非洲维管植物RAINBIO物种名录
- **LMA_herbarium**:研究人员在莫桑比克马普托农业研究所标本馆观测到的标本
- **Kitwe_herbarium**:研究人员在赞比亚基特韦林业部森林研究分部标本馆观测到的标本
- **Edinburgh_herbarium**:研究人员在英国爱丁堡皇家植物园标本馆观测到的标本
- **Windhoek_herbarium**:研究人员在纳米比亚国家标本馆观测到的标本
- **UPS_herbarium**:研究人员在瑞典乌普萨拉大学进化博物馆标本馆观测到的标本
2. **Identitiy_number**:GBIF为标本记录分配的唯一标识编号
3. **scientificName**:物种二项式学名
4. **Country**:标本采集所在国家
5. **locality**:标本采集点的文本描述
6. **habitat**:标本采集生境的文本描述
7. **day**:标本采集当日的公历日期
8. **month**:标本采集所在的公历月份
9. **year**:标本采集的公历年份
10. **recordedBy**:标本采集人员
11. **rec.Number**:采集者为本次标本集合分配的编号
12. **Error.Diam.**:地理配准的空间误差(单位:千米)
13. **Min_Elev.M.**:最低海拔(单位:米)
14. **Max_Elev.M.**:最高海拔(单位:米)
15. **decimalLatitude**:纬度坐标
16. **decimalLongitude**:经度坐标
17. **Label..notes**:标本采集地点的附加记录信息
18. **Georeferenced**:标记该标本记录是否在本研究中完成地理配准:1代表已完成配准,0代表未配准(即通过采集点文本描述推断得到坐标)
**taxonomic_references_from_which_trait_values_obtained.docx**
本文件收录了用于提取物种性状值的分类学学术出版物。
提供机构:
figshare
创建时间:
2022-10-03



