Supplementary Tables
收藏Mendeley Data2024-01-31 更新2024-06-27 收录
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Supplementary Tables (Table S1, Table S2, Table S3, and Table S4) for a research of Paederus fuscipes (title: The pederin-producing bacteria density dynamics in Paederus fuscipes at different developmental stages). Table S1. Summary statistics of Paederus fuscipes transcriptome sequencing data at different developmental stages. Table S2.The statistics information for gene annotation. Note: NR, nonredundant protein (NR) database; NT, nucleotide sequences (NT) database; KEGG, Kyoto Encyclopedia of Genes and Genomes database; Swiss-Prot, a manually annotated and reviewed protein sequence database; Pfam, Protein family database, GO, Gene Ontology database; COG, the Cluster of Orthologous Groups (COG) database. Table S3. The stage specific differentially expressed unigenes in Paederus fuscipes at different developmental stages. Table S4. The putative pattern recognition receptors (PRRs) found in Paederus fuscipes based on the annotation results of NR description. PGRP, peptidoglycan recognition protein; GNBP, gram-negative bacteria-binding protein; SR, scavenger receptor; CTL, C-type lectin; apoLp-III, apolipophorin III; GALE, galectin; Dscam, down syndrome cell adhesion molecule; FREP, fibrinogen-related protein; TLR, Toll-like receptor.
本研究(研究标题:《不同发育阶段菲岛隐翅虫(Paederus fuscipes)中产伪步行虫毒素细菌的密度动态》)配套的补充表格含表S1、表S2、表S3及表S4,具体如下:
表S1 不同发育阶段菲岛隐翅虫转录组测序数据的汇总统计信息。
表S2 基因注释相关统计信息。注:NR(nonredundant protein database,非冗余蛋白质数据库);NT(nucleotide sequences database,核苷酸序列数据库);KEGG(Kyoto Encyclopedia of Genes and Genomes database,京都基因与基因组百科全书数据库);Swiss-Prot,即经人工注释并审核的蛋白质序列数据库;Pfam(Protein family database,蛋白质家族数据库);GO(Gene Ontology database,基因本体数据库);COG(Cluster of Orthologous Groups database,直系同源簇数据库)。
表S3 不同发育阶段菲岛隐翅虫的阶段特异性差异表达单基因(unigene)。
表S4 基于NR注释结果,在菲岛隐翅虫中鉴定得到的推定模式识别受体(pattern recognition receptors, PRRs)。相关缩写对应如下:PGRP(peptidoglycan recognition protein,肽聚糖识别蛋白);GNBP(gram-negative bacteria-binding protein,革兰氏阴性菌结合蛋白);SR(scavenger receptor,清道夫受体);CTL(C-type lectin,C型凝集素);apoLp-III(apolipophorin III,载脂蛋白III);GALE(galectin,半乳糖凝集素);Dscam(down syndrome cell adhesion molecule,唐氏综合征细胞黏附分子);FREP(fibrinogen-related protein,纤维蛋白原相关蛋白);TLR(Toll-like receptor,Toll样受体)。
创建时间:
2024-01-31



