Additional file 6 of Single nucleotide polymorphism discovery from expressed sequence tags in the waterflea Daphnia magna

Additional file 6:List of the EST-linked SNP and descriptive statistics. List of SNP markers in the set of 147 SNP targeted for genotyping with the Sequenom MassARRAY platform. The protein changes both at the synonymous (S) and the non-synonymous (NS) sites, the codon position of the point mutation, the genotyping success rate, and the minor allele frequency are shown. The characteristics of the contigs from where the SNPs were developed are also shown, in terms of length, polymorphism, and number of sequences in the contig. Nr: SNPs that did not fit in any assay design. (XLS 56 KB)

附加文件6：表达序列标签（EST）关联单核苷酸多态性（SNP）列表及描述性统计信息。本列表收录了采用Sequenom MassARRAY平台进行基因分型的147个目标单核苷酸多态性标记，同时展示了同义突变（S）与非同义突变（NS）位点对应的蛋白变异情况、点突变的密码子位置、基因分型成功率及次要等位基因频率。此外还列出了开发上述单核苷酸多态性位点所依托的重叠群（contig）的相关特征，包括其长度、多态性及重叠群内的序列总数。Nr类：无法适配任何检测设计的单核苷酸多态性位点。（XLS格式，文件大小56 KB）