Data sets used in the paper: Tripartite networks show that keystone species can multitask
收藏DataCite Commons2025-06-01 更新2024-07-28 收录
下载链接:
https://figshare.com/articles/dataset/Data_sets_used_in_the_paper_Tripartite_networks_show_that_keystone_species_can_multitask/14333198/1
下载链接
链接失效反馈官方服务:
资源简介:
These data sets were used used in the the publication Timóteo et al. (2022), Tripartite networks show that keystone species can multitask, doi: 10.1111/1365-2745.13391. Each tripartite networks is constituted by a pair of bipartite subnetworks connected by species in the level common to both subnetworks. Each pair of bipartite subnetworks is identified by starting with the same number and name (XX_YYYY_; e.g. 01_AZORES_). The analysis was carry out with the R scripts available from https://doi.org/10.6084/m9.figshare.14334038. For details on the original works in which the dataset were used refer to the following list: <br> Data set References 01_AZORES (Heleno et al. 2013, unpublished) 02_AZORES (Heleno et al. 2010) 03_AZORES (Heleno et al. 2009) 04_GALAPAGOS (Heleno et al. 2012; Traveset et al. 2015) 05_DORSET (Carvalheiro et al. 2010) 06_NORWOOD (Pocock et al. 2010, 2012) 07_NORWOOD (Pocock et al. 2012) 08_NORWOOD (Pocock et al. 2012) 09_BORNEO (Blüthgen et al. 2006) 10_COIMBRA (Norte et al. 2012, da Silva et al. unpublished) 11_BEIRA (López-Núñez et al. 2017) 12_PURBECK Henson et al. (2009) 13_HAWAII (Henneman & Memmott 2001) 14_BRISTOL (Macfadyen et al. 2009) 15_POLAND (Albrecht et al. 2014) 16_GALAPAGOS (Heleno et al. 2012, unpublished) 17_MOZAMBIQUE (Correia et al. 2019) 18_NEWZEALAND (Peralta et al. 2014; Frost et al. 2016) <br> Reference list: Albrecht, J., Gertrud Berens, D., Jaroszewicz, B., Selva, N., Brandl, R. & Farwig, N. (2014). Correlated loss of ecosystem services in coupled mutualistic networks. Nat. Commun., 5, 3810. Blüthgen, N., Mezger, D. & Linsenmair, K.E. (2006). Ant-hemipteran trophobioses in a Bornean rainforest - diversity, specificity and monopolisation. Insectes Soc., 53, 194–203. Carvalheiro, L.G., Buckley, Y.M. & Memmott, J. (2010). Diet breadth influences how the impact of invasive plants is propagated through food webs. Ecology, 91, 1063–1074. Correia, M., Rodríguez-Echeverría, S., Timóteo, S., Freitas, H. & Heleno, R. (2019). Integrating plant species contribution to mycorrhizal and seed dispersal mutualistic networks. Biol. Lett., 15, 20180770. Frost, C.M., Peralta, G., Rand, T.A., Didham, R.K., Varsani, A. & Tylianakis, J.M. (2016). Apparent competition drives community-wide parasitism rates and changes in host abundance across ecosystem boundaries. Nat. Commun., 7, 12644. Heleno, R., Lacerda, I., Ramos, J.A. & Memmott, J. (2010). Evaluation of restoration effectiveness: community response to the removal of alien plants. Ecol. Appl., 20, 1191–203. Heleno, R.H., Ceia, R.S., Ramos, J.A. & Memmott, J. (2009). Effects of alien plants on insect abundance and biomass: a food-web approach. Conserv. Biol., 23, 410–419. Heleno, R.H., Olesen, J.M., Nogales, M., Vargas, P. & Traveset, A. (2012). Seed dispersal networks in the Galapagos and the consequences of alien plant invasions. Proc. R. Soc. B Biol. Sci., 280, 20122112–20122112. Heleno, R.H., Ramos, J.A. & Memmott, J. (2013). Integration of exotic seeds into an Azorean seed dispersal network. Biol. Invasions, 15, 1143–1154. Henneman, M.L. & Memmott, J. (2001). Infiltration of a Hawaiian Community by Introduced Biological Control Agents. Science (80-. )., 293, 1314–1316. López-Núñez, F.A., Heleno, R.H., Ribeiro, S., Marchante, H. & Marchante, E. (2017). Four-trophic level food webs reveal the cascading impacts of an invasive plant targeted for biocontrol. Ecology, 98, 782–793. Macfadyen, S., Gibson, R., Polaszek, A., Morris, R.J., Craze, P.G., Planqué, R., et al. (2009). Do differences in food web structure between organic and conventional farms affect the ecosystem service of pest control? Ecol. Lett., 12, 229–238. Norte, A.C., de Carvalho, I.L., Ramos, J.A., Gonçalves, M., Gern, L. & Núncio, M.S. (2012). Diversity and seasonal patterns of ticks parasitizing wild birds in western Portugal. Exp. Appl. Acarol., 58, 327–339. Peralta, G., Frost, C.M., Rand, T.A., Didham, R.K. & Tylianakis, J.M. (2014). Complementarity and redundancy of interactions enhance attack rates and spatial stability in host–parasitoid food webs. Ecology, 95, 1888–1896. Pocock, M.J.O., Evans, D.M. & Memmott, J. (2010). The impact of farm management on species-specific leaf area index (LAI): Farm-scale data and predictive models. Agric. Ecosyst. Environ., 135, 279–287. Pocock, M.J.O., Evans, D.M. & Memmott, J. (2012). The robustness and restoration of a network of ecological networks. Science (80-. )., 335, 973–977. Traveset, A., Chamorro, S., Olesen, J.M. & Heleno, R. (2015). Space, time and aliens: charting the dynamic structure of Galápagos pollination networks. AoB Plants, 7, plv068.
本数据集已应用于Timóteo等人2022年发表的论文《三重网络表明关键物种可兼具多重功能》(Tripartite networks show that keystone species can multitask),DOI:10.1111/1365-2745.13391。
每个三重网络(Tripartite networks)均由一对二分副网络(Bipartite subnetworks)构成,两类副网络通过二者共通的物种层级实现连接。每一组二分副网络均以统一的编号与名称进行标识,格式为XX_YYYY_(例如01_AZORES_)。
本研究的分析代码为R脚本(R scripts),可通过链接https://doi.org/10.6084/m9.figshare.14334038获取。
若需了解本数据集所依托的原始研究详情,请参阅以下列表:
### 数据集参考文献
01_AZORES(Heleno等,2013,未发表);02_AZORES(Heleno等,2010);03_AZORES(Heleno等,2009);04_GALAPAGOS(Heleno等,2012;Traveset等,2015);05_DORSET(Carvalheiro等,2010);06_NORWOOD(Pocock等,2010、2012);07_NORWOOD(Pocock等,2012);08_NORWOOD(Pocock等,2012);09_BORNEO(Blüthgen等,2006);10_COIMBRA(Norte等,2012;da Silva等,未发表);11_BEIRA(López-Núñez等,2017);12_PURBECK(Henson等,2009);13_HAWAII(Henneman与Memmott,2001);14_BRISTOL(Macfadyen等,2009);15_POLAND(Albrecht等,2014);16_GALAPAGOS(Heleno等,2012,未发表);17_MOZAMBIQUE(Correia等,2019);18_NEWZEALAND(Peralta等,2014;Frost等,2016)
### 完整参考文献列表
1. Albrecht, J., Gertrud Berens, D., Jaroszewicz, B., Selva, N., Brandl, R. & Farwig, N. (2014). Correlated loss of ecosystem services in coupled mutualistic networks. *Nature Communications(Nat. Commun.)*, 5, 3810.
2. Blüthgen, N., Mezger, D. & Linsenmair, K.E. (2006). Ant-hemipteran trophobioses in a Bornean rainforest - diversity, specificity and monopolisation. *Insectes Sociaux(Insectes Soc.)*, 53, 194–203.
3. Carvalheiro, L.G., Buckley, Y.M. & Memmott, J. (2010). Diet breadth influences how the impact of invasive plants is propagated through food webs. *Ecology(Ecology)*, 91, 1063–1074.
4. Correia, M., Rodríguez-Echeverría, S., Timóteo, S., Freitas, H. & Heleno, R. (2019). Integrating plant species contribution to mycorrhizal and seed dispersal mutualistic networks. *Biology Letters(Biol. Lett.)*, 15, 20180770.
5. Frost, C.M., Peralta, G., Rand, T.A., Didham, R.K., Varsani, A. & Tylianakis, J.M. (2016). Apparent competition drives community-wide parasitism rates and changes in host abundance across ecosystem boundaries. *Nature Communications(Nat. Commun.)*, 7, 12644.
6. Heleno, R., Lacerda, I., Ramos, J.A. & Memmott, J. (2010). Evaluation of restoration effectiveness: community response to the removal of alien plants. *Ecological Applications(Ecol. Appl.)*, 20, 1191–1203.
7. Heleno, R.H., Ceia, R.S., Ramos, J.A. & Memmott, J. (2009). Effects of alien plants on insect abundance and biomass: a food-web approach. *Conservation Biology(Conserv. Biol.)*, 23, 410–419.
8. Heleno, R.H., Olesen, J.M., Nogales, M., Vargas, P. & Traveset, A. (2012). Seed dispersal networks in the Galapagos and the consequences of alien plant invasions. *Proceedings of the Royal Society B: Biological Sciences(Proc. R. Soc. B Biol. Sci.)*, 280, 20122112–20122112.
9. Heleno, R.H., Ramos, J.A. & Memmott, J. (2013). Integration of exotic seeds into an Azorean seed dispersal network. *Biological Invasions(Biol. Invasions)*, 15, 1143–1154.
10. Henneman, M.L. & Memmott, J. (2001). Infiltration of a Hawaiian Community by Introduced Biological Control Agents. *Science(Science (80-.))*, 293, 1314–1316.
11. López-Núñez, F.A., Heleno, R.H., Ribeiro, S., Marchante, H. & Marchante, E. (2017). Four-trophic level food webs reveal the cascading impacts of an invasive plant targeted for biocontrol. *Ecology(Ecology)*, 98, 782–793.
12. Macfadyen, S., Gibson, R., Polaszek, A., Morris, R.J., Craze, P.G., Planqué, R., et al. (2009). Do differences in food web structure between organic and conventional farms affect the ecosystem service of pest control? *Ecology Letters(Ecol. Lett.)*, 12, 229–238.
13. Norte, A.C., de Carvalho, I.L., Ramos, J.A., Gonçalves, M., Gern, L. & Núncio, M.S. (2012). Diversity and seasonal patterns of ticks parasitizing wild birds in western Portugal. *Experimental and Applied Acarology(Exp. Appl. Acarol.)*, 58, 327–339.
14. Peralta, G., Frost, C.M., Rand, T.A., Didham, R.K. & Tylianakis, J.M. (2014). Complementarity and redundancy of interactions enhance attack rates and spatial stability in host–parasitoid food webs. *Ecology(Ecology)*, 95, 1888–1896.
15. Pocock, M.J.O., Evans, D.M. & Memmott, J. (2010). The impact of farm management on species-specific leaf area index (LAI): Farm-scale data and predictive models. *Agricultural Ecosystems & Environment(Agric. Ecosyst. Environ.)*, 135, 279–287.
16. Pocock, M.J.O., Evans, D.M. & Memmott, J. (2012). The robustness and restoration of a network of ecological networks. *Science(Science (80-.))*, 335, 973–977.
17. Traveset, A., Chamorro, S., Olesen, J.M. & Heleno, R. (2015). Space, time and aliens: charting the dynamic structure of Galápagos pollination networks. *AoB Plants(AoB Plants)*, 7, plv068.
提供机构:
figshare
创建时间:
2021-04-04



