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CytoSimplex tutorial data - MultiVelo analysis on HSPC

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DataCite Commons2024-05-21 更新2024-09-03 收录
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https://figshare.com/articles/dataset/CytoSimplex_tutorial_data_-_MultiVelo_analysis_on_HSPC/25870927
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The H5AD file contains the analysis carried out by MultiVelo, the tutorial of which can be found at https://multivelo.readthedocs.io/en/latest/MultiVelo_Fig5.htmlThe annotation to be used can be accessed with <code>adata.obs['leiden']</code>, the cell-cell transition graph from the velocity analysis can be accessed with <code>adata.uns['velo_s_norm_graph']</code>Contains 11,605 cells in total.The associated raw counts data can be found at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6403410<br>

本H5AD文件存储了由MultiVelo完成的分析内容,其配套教程可访问地址为https://multivelo.readthedocs.io/en/latest/MultiVelo_Fig5.html。可通过`adata.obs['leiden']`调取所需的细胞注释信息,通过`adata.uns['velo_s_norm_graph']`获取速度分析得到的细胞间转换图谱。该数据集总计包含11605个细胞。相关原始计数数据可通过链接https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6403410获取。
提供机构:
figshare
创建时间:
2024-05-21
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