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Functional annotation of Non-redundant ORF unigenes to Gene Ontology, KEGG and Protein Family databases of "De novo assembly of the Brown trout (Salmo trutta m. fario) brain and muscle transcriptome: transcript annotation, tissue differential expression profile and SNP discovery"

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DataCite Commons2020-09-29 更新2024-07-28 收录
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https://figshare.com/articles/dataset/Functional_annotation_of_Non-redundant_ORF_unigenes_to_Gene_Ontology_KEGG_and_Protein_Family_databases_of_De_novo_assembly_of_the_Brown_trout_Salmo_trutta_m_fario_brain_and_muscle_transcriptome_transcript_annotation_tissue_differential_expr/12905777/1
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This data set contains processed results of the f<b>unctional annotation </b>of Non-redundant ORF unigenes to Gene Ontology, the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Protein Family databases.GO term were simplified using a generic GOSlim vocabulary (GOslim annotation of non-redundant ORF unigene sequences.xlsx). Unigenes mapped to the reference canonical pathways in the KEGG database (KEGG pathway annotation of non-redundant ORF unigene sequences.xlsx). Protein motif were assigned by Pfam database (Protein family (Pfam) assignation to non-redundant ORF unigenes.xlsx).

本数据集包含非冗余开放阅读框(Open Reading Frame, ORF)单基因簇针对基因本体(Gene Ontology, GO)、京都基因与基因组百科全书(KEGG)以及蛋白质家族数据库的功能注释处理结果。已采用通用GOSlim词汇表对基因本体术语进行简化,对应文件为《非冗余ORF单基因序列GOSlim注释.xlsx》。将单基因簇比对至KEGG数据库中的参考经典通路,对应文件为《非冗余ORF单基因序列KEGG通路注释.xlsx》。通过Pfam数据库对蛋白质基序进行注释分配,对应文件为《非冗余ORF单基因序列蛋白质家族(Pfam)注释.xlsx》。
提供机构:
figshare
创建时间:
2020-09-02
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