Dataset for specific analysis
收藏DataCite Commons2025-07-29 更新2025-09-08 收录
下载链接:
https://figshare.com/articles/dataset/Dataset_for_specific_analysis/29662031
下载链接
链接失效反馈官方服务:
资源简介:
Genes dataset for specific analysis of cell types, brain tissue divisions and life stages.ctd_AHBA_human.rds: the Allen Cell Types Database (https://celltypes.brain-map.org/)ctd_DRONC_human.rds: <i>Habib, N.</i><i> et al.</i><i> Massively parallel single-nucleus RNA-seq with DroNc-seq. </i><i>Nature methods</i><i> </i><b><i>14</i></b><i>, 955-958 (2017).</i>ctd_td_Brain_region.rds: Gene expression data with hippocampal subfield and entorhinal cortex annotations were obtained from GSE278723 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278723). td_Lifespan.rda: Gene expression data across different developmental stages of the human brain were sourced from the BrainSpan Atlas (https://www.brainspan.org/static/download.html).Notably, the neuronal cell dataset provided by the Karolinska Institute is the default reference in the <b>EWCE</b> R package and is readily accessible during execution.
用于细胞类型、脑组织分区及生命阶段特异性分析的基因数据集如下:
1. ctd_AHBA_human.rds:数据来源于艾伦细胞类型数据库(Allen Cell Types Database,https://celltypes.brain-map.org/)
2. ctd_DRONC_human.rds:数据源自Habib N. 等学者的研究《基于DroNc-seq的大规模并行单细胞核RNA测序》(Massively parallel single-nucleus RNA-seq with DroNc-seq),发表于《自然·方法学》(Nature Methods)2017年第14卷,第955-958页
3. ctd_td_Brain_region.rds:带有海马亚区与内嗅皮层注释的基因表达数据获取自GSE278723数据集(https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278723)
4. td_Lifespan.rda:覆盖人类大脑不同发育阶段的基因表达数据源自BrainSpan图谱(BrainSpan Atlas,https://www.brainspan.org/static/download.html)
值得注意的是,卡罗林斯卡研究所提供的神经元细胞数据集是EWCE R包的默认参考数据集,在程序运行过程中可直接调用。
提供机构:
figshare
创建时间:
2025-07-29



