Additional file 3 of FT-GPI, a highly sensitive and accurate predictor of GPI-anchored proteins, reveals the composition and evolution of the GPI proteome in Plasmodium species
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Additional file 3: Table S3. Taxonomic description of 46 isolates from the Haemosporida order. The proteomes of 46 isolates distributed over the four major subgenera of Plasmodium species and one Hepatocystis parasite were downloaded from PlasmoDB database. Colours indicate the main taxonomic groups found in the literature. Laverania-Pg differentiated P. gaboni and close species from the P. falciparum/P. reichenowi group of parasites [68]. Human-infecting parasites are in bold. PlasmoDB and other source of information were used to establish the host and geographic origin of the different isolates. P. faciparum 3D7 is a reference laboratory strain and first described GPI-proteome in apicomplexa [17]. Cloned: genome sequence was obtained from long-term, established laboratory strains that often pass through a purification step. All P. falciparum isolates are of clinical origin. Clinical: non-P. falciparum isolates that were recovered from malaria patients
附加文件3:表S3。血孢子虫目(Haemosporida)46株分离物的分类学描述。本研究从PlasmoDB数据库下载了分布于疟原虫属(Plasmodium)4个主要亚属以及1株肝簇虫属(Hepatocystis)寄生虫的46株分离物的蛋白质组数据。配色用于标注文献中已确定的主要分类类群。拉维利亚亚属(Laverania)-Pg分类标准将加蓬疟原虫(P. gaboni)及其近缘物种与恶性疟原虫(P. falciparum)/赖氏疟原虫(P. reichenowi)寄生虫类群区分开来[68]。感染人类的寄生虫名称以粗体标注。通过PlasmoDB数据库及其他信息源,明确了各分离物的宿主来源与地理分布。恶性疟原虫(P. falciparum)3D7是经典实验室参考株,也是顶复门(Apicomplexa)生物中首个被报道的糖基磷脂酰肌醇(Glycosylphosphatidylinositol, GPI)蛋白质组[17]。克隆株:基因组序列来自长期培养的已建系实验室菌株,此类菌株通常经过纯化步骤。所有恶性疟原虫分离物均为临床来源。临床来源:指从疟疾患者体内分离得到的非恶性疟原虫分离物。
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figshare
创建时间:
2024-08-13



