MOESM2 of Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota
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Additional file 1: Table S1. Statistics for 346 SAGs obtained from the mouse fecal microbiome Table S2. Taxonomic annotation for 346 SAGs and 28 SAGCs obtained from the mouse fecal microbiome Table S3. Comparison of OTU detection between 16S rRNA gene amplicon sequencing and single-cell sequencing Table S4. Statistics for 28 composite SAGs (IMSAGCs) obtained from the mouse fecal microbiome. Table S5. Detailed statistics for medium and high-quality draft genomes obtained from the mouse fecal microbiome Table S6. Statistics for Bacteroides genomes used in comparative genome analysis Table S7. Numbers of signal peptide-containing predicted glycoside hydrolases/polysaccharide lyases Table S8. Statistics for high completeness SAGs (> 80%) associated with inulin uptake and TCA cycle-mediated metabolism Table S9. Statistics for conserved metabolic modules in qualified draft genomes and known Bacteroides spp. reference genomes.
附加文件1:表S1。从小鼠粪便微生物组中获取的346个单扩增基因组(SAGs)的统计信息。
表S2。从小鼠粪便微生物组中获取的346个单扩增基因组(SAGs)与28个单扩增基因组簇(SAGCs)的分类学注释信息。
表S3。16S rRNA基因扩增子测序与单细胞测序的操作分类单元(OTU)检出情况比较。
表S4。从小鼠粪便微生物组中获取的28个复合单扩增基因组(IMSAGCs)的统计信息。
表S5。从小鼠粪便微生物组中获取的中等质量与高质量草图基因组的详细统计信息。
表S6。用于比较基因组分析的拟杆菌属(Bacteroides)基因组的统计信息。
表S7。含信号肽的预测糖苷水解酶/多糖裂解酶的数量统计。
表S8。与菊糖摄取及三羧酸(TCA)循环介导的代谢相关的高完整性(> 80%)单扩增基因组的统计信息。
表S9。合格草图基因组与已知拟杆菌属参考基因组中的保守代谢模块的统计信息。
创建时间:
2023-06-28



