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Additional file 8: of In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant

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DataCite Commons2020-08-27 更新2024-07-27 收录
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https://springernature.figshare.com/articles/Additional_file_8_of_In_silico_analysis_of_fungal_small_RNA_accumulation_reveals_putative_plant_mRNA_targets_in_the_symbiosis_between_an_arbuscular_mycorrhizal_fungus_and_its_host_plant/7802933/1
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Results of DE analysis of sRNA reads originated from Mtr-mRNAs for identification of mycorrhizal induced secondary siRNAs. We reported only the transcripts with a significant increase in number of mapped sRNAs reads in RM (mycorrhizal roots) compared to RC (non-mycorrhizal roots) condition (log2FoldChange > 0, padj

本研究针对源自Mtr-mRNAs的小RNA(small RNA, sRNA)读段开展差异表达分析(Differential Expression Analysis, DE),以鉴定菌根诱导的次级小干扰RNA(secondary siRNA)。本研究仅报道在菌根根系(RM, mycorrhizal roots)样本相较于非菌根根系(RC, non-mycorrhizal roots)样本时,比对匹配的sRNA读段数量显著上调的转录本,其筛选条件为log2倍数变化(log2FoldChange)>0且校正后P值(padj)[原文此处未完整标注]。
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figshare
创建时间:
2019-03-05
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