Supplementary Material to Resolving Cryptic Species Complexes in Marine Protists: Phylogenetic Haplotype Networks meet Global DNA Metabarcoding Datasets.

The file "scripts.txt" includes the scripts for fasta extraction from Tara Oceans dataset and generation of heatmaps and distribution maps.The nexus files "input_network_OSD" and "input_network_OSD-V9_Tara_Oceans" are the input files for phylogenetic networks.The fasta files "V4_OSD_curvi_validated.fasta" and "V9_TARA_LW_curvi_validated.fasta" contain the validated <i>Chaetoceros curvisetus</i> sequences from OSD and OSD-V9+Tara Oceans data.The Excel file "OSD_plus_OSD-V9_Tara_abundance_tables" contains the abundance table for the OSD and OSD-V9+Tara Oceans <i>Chaetoceros curvisetus</i> validated sequences.

文件"scripts.txt"包含用于从塔拉海洋（Tara Oceans）数据集提取FASTA（FASTA）序列、生成热图（heatmap）与分布图谱（distribution map）的脚本。NEXUS（NEXUS）格式文件"input_network_OSD"与"input_network_OSD-V9_Tara_Oceans"为系统发育网络（phylogenetic networks）的输入文件。FASTA格式文件"V4_OSD_curvi_validated.fasta"和"V9_TARA_LW_curvi_validated.fasta"收录了源自OSD及OSD-V9+塔拉海洋数据集的经验证的弯角角毛藻（*Chaetoceros curvisetus*）序列。Excel文件"OSD_plus_OSD-V9_Tara_abundance_tables"包含了OSD与OSD-V9+塔拉海洋数据集内经验证的弯角角毛藻序列的丰度表（abundance table）。