Additional file 7: of A microbiome case-control study of recurrent acute otitis media identified potentially protective bacterial genera
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Table S3. Complete list of significantly differentially abundant OTUs determined by metagenomeSeq. All differentially abundant OTUs between a) MEF and MEF; b) MEF and NPS; c) MER and NPS; d) ECS and MEF are shown with their log fold change, p-values and mean and median abundance. OTUs in bold/grey are those above the selected threshold of at least 0.35% mean or median abundance in at least one group, and were present in both sets of samples where applicable. Set 1 refers to the set of samples were the left or right ear was chosen at random; these numbers are reported in results. Set 2 refers to the set of samples where the opposite ear was chosen; these results were only used for validation of the differentially abundant OTUs from Set 1. (XLSX 29 kb)
附表S3。经宏基因组测序分析工具metagenomeSeq鉴定得到的显著差异丰度操作分类单元(Operational Taxonomic Unit,OTU)完整列表。本列表包含以下四组间的全部差异丰度OTU:a) MEF组与MEF组;b) MEF组与NPS组;c) MER组与NPS组;d) ECS组与MEF组。各OTU均附带其对数折叠变化值、p值以及平均丰度与中位丰度。以粗体或灰色标注的OTU,指在至少一组样本中平均丰度或中位丰度达到所选阈值(≥0.35%),且在适用情况下的两组样本中均被检出。集1(Set 1)指随机选取左耳或右耳的样本集合,相关结果已在研究结果中报道。集2(Set 2)指选取对侧耳的样本集合,该集合的结果仅用于验证集1中鉴定得到的差异丰度OTU。(XLSX格式,文件大小29 KB)
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figshare
创建时间:
2018-02-20



