Pvalue tables for UMAP enrichments and differentially abundant genes

The tables in this file include the raw pvalues and fdr corrected pvalues for the manuscript <strong>Quantifying shared and unique gene content across 17 microbial ecosystems</strong>. <br> The files <br> AQUATIC_TERRESTRIAL_CONGENES_V2_SEQS_sigGenes_pval_fdr.txt <br> HUMAN-GUT_NON-HUMAN-GUT_CONGENES_SEQS_V2_sigGenes_pval_fdr.txt <br> GUT_ENV_CONGENES_SEQS_sigGenes_pval_fdr.txt <br> are tables of pvalues where columns indicate the two groups a differential abundance test was done between. The rows are each gene tested. Each file contains the genes that were prevalent in both aquatic and terrestrial microbiomes only, human gut and non human gut microbiomes only, or gut and environmental microbiomes only. Then differential abundance tests on these genes in a new set of samples were done comparing the ecologies in each column to confirm the prevalence results. <br> The files <br> taxa_enrichment_table_all_clusters.csv gene_enrichment_table_all_clusters.csv <br> are the results from testing wheter a given gene or taxa where enriched in any of the UMAP clusters.

本文件所收录的表格，涵盖了论文《定量分析17个微生物生态系统中共存与特有基因含量》（*Quantifying shared and unique gene content across 17 microbial ecosystems*）的原始p值与经错误发现率（False Discovery Rate, FDR）校正后的p值。

以下文件：`AQUATIC_TERRESTRIAL_CONGENES_V2_SEQS_sigGenes_pval_fdr.txt`、`HUMAN-GUT_NON-HUMAN-GUT_CONGENES_SEQS_V2_sigGenes_pval_fdr.txt`、`GUT_ENV_CONGENES_SEQS_sigGenes_pval_fdr.txt`，均为p值表格，其中列代表差异丰度检验所比较的两个组别，行则代表每一个被检验的基因。每个文件仅包含仅同时存在于水生与陆地微生物组、仅同时存在于人类肠道与非人类肠道微生物组，或是仅同时存在于肠道与环境微生物组的基因。随后，研究人员针对新样本集中的这些基因开展差异丰度检验，通过比较各列对应的生态环境以验证其普遍存在性结果。

以下文件：`taxa_enrichment_table_all_clusters.csv`与`gene_enrichment_table_all_clusters.csv`，为检验特定基因或类群是否在任意UMAP簇中富集的分析结果。