Fig2B_RACE_YKT6_R2_LG292_annotated.tiff

Xrn1 knock out A549 cells were infected with WT influenza A/Puerto Rico/8/1934 virus ("PR8") or PA-X deficient PR8-PA(∆X), or mock infected for 16 hours before RNA extraction. 5’RACE was then performed using primers specific for STOML2,YKT6, TUBA1B, BCAP31 ~250-300 nucleotides (nt) downstream of the predicted cut sites. The PCR products were run on an agarose gel.

将Xrn1基因敲除的A549细胞分别感染野生型甲型流感病毒A/Puerto Rico/8/1934（简称PR8）、PA-X缺陷型PR8-PA(∆X)毒株，或进行模拟感染；所有样本均在感染或模拟感染16小时后完成RNA提取。随后，针对STOML2、YKT6、TUBA1B、BCAP31基因，在其预测剪切位点下游约250~300核苷酸（nt）处设计特异性引物，开展5'末端快速扩增（5' Rapid Amplification of cDNA Ends, 5'RACE）实验。将所得PCR扩增产物进行琼脂糖凝胶电泳检测。