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Additional file 2 of Assessing genomic diversity and signatures of selection in Pinan cattle using whole-genome sequencing data

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Mendeley Data2024-06-27 更新2024-06-27 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Assessing_genomic_diversity_and_signatures_of_selection_in_Pinan_cattle_using_whole-genome_sequencing_data/20113949/1
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Additional file 2: Table S1. Summary of sequencing data. Table S2. List of additional cattle samples for analysis of genetic background in Pinan cattle. Table S3. Distribution of SNPs identified in cattle breeds within various genomic regions annotated by ANNOVAR. Only the breeds with a sample size no less than 5 were calculated in the table. Table S4. CV error corresponding to different K values. Table S5. 92 selective signal candidate regions identified by DCMS.

附加文件2:表S1。测序数据汇总表。 表S2:用于分析派南牛(Pinan cattle)遗传背景的额外牛样本列表。 表S3:经ANNOVAR注释的不同基因组区域中,各牛品种鉴定出的单核苷酸多态性(Single Nucleotide Polymorphisms, SNPs)分布情况。本表仅纳入样本量不小于5的牛品种进行统计。 表S4:对应不同K值的交叉验证误差(Cross-Validation Error, CV error)。 表S5:通过DCMS鉴定得到的92个选择信号候选区域。
创建时间:
2023-06-28
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