CASF-2016 dataset prepared for DeepDock evaluation
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https://figshare.com/articles/dataset/CASF-2016_dataset_prepared_for_DeepDock_evaluation/14510913/1
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资源简介:
CASF-2016 data used to evaluate DeepDock. The file contains information of 285 protein ligand complexes extracted from CASF-2016. They have been preprocessed using MaSSIF and are ready to be used as input using Pytorch geometric. The target is represented by a mesh, each node contains 4 physchem properties. The ligand is represented as a 2D graph where node features represent atom type and edge features represent bond types.
本数据集为用于评估DeepDock的CASF-2016数据集。该文件包含从CASF-2016中提取的285个蛋白质-配体复合物(protein ligand complexes)的相关信息。所有复合物均已通过MaSSIF完成预处理,可直接作为PyTorch几何(PyTorch Geometric)的输入数据使用。该数据集中,靶点以网格(mesh)形式表征,每个节点包含4种物理化学(physchem)性质;配体则以二维图形式表征,其节点特征用于表示原子类型,边特征用于表示键型。
提供机构:
figshare
创建时间:
2021-04-29
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