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Dataset for "Nanocrystallites Modulate Intermolecular Interactions in Cryoprotected Protein Solutions"

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DataCite Commons2023-08-21 更新2024-07-13 收录
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https://su.figshare.com/articles/dataset/Nanocrystallites_Modulate_Intermolecular_Interactions_in_Cryoprotected_Protein_Solutions/23295626/3
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1. "fig_1a.csv": Small-angle scattering intensity I(Q) as a function of the momentum transfer Q measured for 10 mg/ml lysozyme in 23 mol% glycerol-water at different temperatures upon cooling down after subtracting the scattering intensity measured on the pure solvent. (Note: I(Q) in arbitrary units). 2. "fig_1_inset.csv": Radii of gyration as a function of temperature upon cooling and warming as extracted from fitting the I(q)s for the dilute sample with an elliptical form factor. 3. "fig_1b.csv": Small-angle scattering intensity I(Q) as a function of the momentum transfer Q measured for 200 mg/ml lysozyme in 23 mol% glycerol-water at different temperatures upon cooling down after subtracting the scattering intensity measured on the pure solvent. (Note: I(Q) in arbitrary units). 4. "fig_2a.csv": Wide-angle scattering intensity I(Q) as a function of the momentum transfer Q measured for 200 mg/ml lysozyme in 23 mol% glycerol-water for different temperatures upon cooling. (Note: I(Q) in arbitrary units). 5. "fig_2b.csv": Wide-angle scattering intensity I(Q) as a function of the momentum transfer Q measured for 200 mg/ml lysozyme in 23 mol% glycerol-water for different temperatures upon warming up. (Note: I(Q) in arbitrary units). 6. "fig_2c.csv": 2D scattering pattern in the vicinity of Q ≈ 16-20 nm<sup>-1</sup> measured at T = 197 K during heating. 7. "fig_2d.csv": 2D scattering pattern in the vicinity of Q ≈ 16-20 nm<sup>-1</sup> measured at T = 245 K during heating. 8. "fig_2e.csv": Temperature evolution of the I(Q) around the ice Ih[002] diffraction peak centered at Q ≈ 17 nm<sup>−1</sup> upon cooling. 9. "fig_2f.csv": Temperature evolution of the I(Q) around the ice Ih[002] diffraction peak centered at Q ≈ 17 nm<sup>−1</sup> upon warming up. 10. "fig_3a.csv": Temperature dependence of the Q-value of the SAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a deep temperature cycle down to 195 K. 11. "fig_3b.csv": Temperature dependence of the Q-value of the SAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a medium temperature cycle down to 225 K. 12. "fig_3c.csv": Temperature dependence of the Q-value of the SAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a shallow temperature cycle down to 245 K. 13. "fig_3d.csv": Temperature dependence of the Q-value of the WAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a deep temperature cycle down to 195 K. 14. "fig_3e.csv": Temperature dependence of the Q-value of the WAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a medium temperature cycle down to 225 K. 15. "fig_3f.csv": Temperature dependence of the Q-value of the WAXS I(Q) peak position for a 200 mg/ml lysozyme in glycerol-water solution during a shallow temperature cycle down to 245 K 16. "fig_4a.csv": The protein-protein structure factor S(Q) at different temperatures (T = 195-300 K) upon cooling obtained from the fits using the two-Yukawa model. 17. "fig_4b.csv": Temperature dependence of the attraction strength parameter K<sub>1</sub> (in units of k<sub>b</sub>T) extracted from fitting the SAXS curves upon cooling down and warming up. 18. "fig_4c.csv": The two-Yukawa potential at different temperatures (T = 195-300 K) upon cooling down. 19. "fig_4d.csv": The pair distribution function g(r) at different temperatures (T = 195-300 K) derived from the modeled structure factors. Additionally, a Jupyter notebook "open-data.ipynb" which shows how to load and plot the data from the csv files in Python. <br> <br> <br> <br> <br> <br>

1. "fig_1a.csv": 记录了23 mol%甘油-水体系中浓度为10 mg/ml的溶菌酶样品,在降温过程中不同温度下测得的小角散射强度I(Q)随动量转移Q的变化关系,数据已扣除纯溶剂的散射本底。注:I(Q)单位为任意单位。 2. "fig_1_inset.csv": 通过采用椭球形状因子(elliptical form factor)对稀溶液样品的I(q)曲线进行拟合得到的回转半径(radius of gyration)随升降温过程的变化关系。 3. "fig_1b.csv": 记录了23 mol%甘油-水体系中浓度为200 mg/ml的溶菌酶样品,在降温过程中不同温度下测得的小角散射强度I(Q)随动量转移Q的变化关系,数据已扣除纯溶剂的散射本底。注:I(Q)单位为任意单位。 4. "fig_2a.csv": 记录了23 mol%甘油-水体系中浓度为200 mg/ml的溶菌酶样品,在降温过程中不同温度下测得的宽角散射强度I(Q)随动量转移Q的变化关系。注:I(Q)单位为任意单位。 5. "fig_2b.csv": 记录了23 mol%甘油-水体系中浓度为200 mg/ml的溶菌酶样品,在升温过程中不同温度下测得的宽角散射强度I(Q)随动量转移Q的变化关系。注:I(Q)单位为任意单位。 6. "fig_2c.csv": 加热过程中在T=197 K下测得的Q≈16~20 nm⁻¹附近的二维散射图案。 7. "fig_2d.csv": 加热过程中在T=245 K下测得的Q≈16~20 nm⁻¹附近的二维散射图案。 8. "fig_2e.csv": 降温过程中,中心位于Q≈17 nm⁻¹的冰Ih[002]衍射峰附近的I(Q)随温度的演化规律。 9. "fig_2f.csv": 升温过程中,中心位于Q≈17 nm⁻¹的冰Ih[002]衍射峰附近的I(Q)随温度的演化规律。 10. "fig_3a.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至195 K的深温度循环过程中,小角X射线散射(Small-Angle X-ray Scattering, SAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 11. "fig_3b.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至225 K的中温循环过程中,小角X射线散射(SAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 12. "fig_3c.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至245 K的浅温度循环过程中,小角X射线散射(SAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 13. "fig_3d.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至195 K的深温度循环过程中,宽角X射线散射(Wide-Angle X-ray Scattering, WAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 14. "fig_3e.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至225 K的中温循环过程中,宽角X射线散射(WAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 15. "fig_3f.csv": 浓度为200 mg/ml的溶菌酶甘油-水溶液,在降温至245 K的浅温度循环过程中,宽角X射线散射(WAXS)的I(Q)峰位置对应的Q值随温度的变化关系。 16. "fig_4a.csv": 采用双Yukawa模型(two-Yukawa model)拟合得到的,降温过程中不同温度(T=195~300 K)下的蛋白质-蛋白质结构因子S(Q)(structure factor S(Q))。 17. "fig_4b.csv": 通过拟合小角散射曲线得到的吸引强度参数K₁(单位为k_B T,其中k_B为玻尔兹曼常数)随升降温过程的温度依赖关系。 18. "fig_4c.csv": 降温过程中不同温度(T=195~300 K)下的双Yukawa势函数。 19. "fig_4d.csv": 通过建模得到的结构因子推导得到的不同温度(T=195~300 K)下的径向分布函数g(r)(pair distribution function g(r))。 此外,附带了Jupyter Notebook文件"open-data.ipynb",该文档演示了如何在Python环境中加载并绘制这些CSV格式的数据文件。
提供机构:
Stockholm University
创建时间:
2023-08-21
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