Refined, automatic nuclei segmentations in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse kidney (jrc_mus-kidney-2)

<br><b>Segmentation description</b>: Nuclei segmentations in jrc_mus-kidney-2 using Cellpose 3.0.9 with cursory manual corrections.<b>Software</b>: Cellpose 3.0.9<b>Software DOI</b>: https://doi.org/10.1038/s41592-022-01663-4<b>Prediction Duration (seconds)</b>: 814.94<b>GPU</b>: NVIDIA TITAN RTX<b>RAM</b>: 251.0 GiB<b>Label voxel size (nm)</b>: 128 x 128 x 128 (x, y, z)<b>Reconstructed data dimensions (µm)</b>: 102.992 x 101.464 x 110.536 (X,Y,Z)<b>Classes annotated</b>: Nucleus<b>Source dataset (EM) ID</b>: jrc_mus-kidney-2<b>Source dataset (EM) voxel size (nm)</b>: 8.0 x 8.0 x 8.0 (X, Y, Z)<b>Source dataset (EM) data dimensions (µm)</b>: 102.992 x 101.464 x 110.536 (X,Y,Z)<b>Source dataset (EM) DOI</b>: https://doi.org/10.25378/janelia.23411009<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-kidney-2/jrc_mus-kidney-2.zarr/recon-1/labels/inference/segmentations/nuc/<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-kidney-2

<b>分割任务说明</b>：使用Cellpose 3.0.9对jrc_mus-kidney-2数据集进行细胞核分割，并辅以粗略人工校正。<b>软件</b>：Cellpose 3.0.9<b>软件文献DOI</b>：https://doi.org/10.1038/s41592-022-01663-4<b>预测时长（秒）</b>：814.94<b>图形处理器</b>：NVIDIA TITAN RTX<b>内存</b>：251.0 GiB<b>标记体素尺寸（纳米）</b>：128 × 128 × 128（X、Y、Z轴）<b>重建后数据尺寸（微米）</b>：102.992 × 101.464 × 110.536（X、Y、Z轴）<b>注释类别</b>：细胞核<b>电子显微镜源数据集ID</b>：jrc_mus-kidney-2<b>电子显微镜源数据集体素尺寸（纳米）</b>：8.0 × 8.0 × 8.0（X、Y、Z轴）<b>电子显微镜源数据集数据尺寸（微米）</b>：102.992 × 101.464 × 110.536（X、Y、Z轴）<b>电子显微镜源数据集DOI</b>：https://doi.org/10.25378/janelia.23411009<b>数据集访问地址</b>：s3://janelia-cosem-datasets/jrc_mus-kidney-2/jrc_mus-kidney-2.zarr/recon-1/labels/inference/segmentations/nuc/<b>可视化网站</b>：https://openorganelle.janelia.org/datasets/jrc_mus-kidney-2