Gene expression and annotation data. VAE sapplement
收藏DataCite Commons2020-08-26 更新2024-07-27 收录
下载链接:
https://figshare.com/articles/Gene_expression_and_annotation_data_VAE_sapplement/9925115/1
下载链接
链接失效反馈官方服务:
资源简介:
This dataset contains the following tables:ST1 - original_expression.csv -- original raw gene expression counts from scRNA-Seq experiments from DOI: 10.1016/j.cell.2018.02.001 (https://figshare.com/articles/MCA_DGE_Data/5435866) -- only mammary gland samples were used hereST2 - transfer_annotation.csv -- the table with samples annotation (both original and those obtained with style transfer)ST3 - reconstructed_expression.csv -- gene expression values of original samples obtained with our VAE model<br>ST4 - transferred_expression.csv -- semisynthetic samples obtained with style transfer
本数据集包含如下表格:
ST1 - original_expression.csv:源自DOI:10.1016/j.cell.2018.02.001(数据集链接:https://figshare.com/articles/MCA_DGE_Data/5435866)的单细胞RNA测序(scRNA-Seq)实验原始基因表达计数数据,本研究仅选用其中的乳腺组织样本;
ST2 - transfer_annotation.csv:包含样本注释信息的表格,涵盖原始样本注释及经风格迁移得到的样本注释结果;
ST3 - reconstructed_expression.csv:通过本研究的变分自编码器(VAE)模型对原始样本进行重构得到的基因表达值;
ST4 - transferred_expression.csv:通过风格迁移方法生成的半合成样本。
提供机构:
figshare
创建时间:
2019-10-03



