Additional file 1: Table S1. of Clusterization in head and neck squamous carcinomas based on lncRNA expression: molecular and clinical correlates

500 lncRNA genes with the most variable expression in 426 HNSCC samples from TCGA. Table S2. lncRNA-based HNSCC TCGA sample clusters. Table S3. Surrogate lncRNA genes per sample cluster. Table S4. Common lncRNAs between surrogate c5 and overexpressed in TP53 WT-infected samples from Nohata et al. (ref [20]). Table S5. Common lncRNAs between surrogate c5 and overexpressed in HPV-infected samples from Nohata et al. (ref [20]). Table S6. Common lncRNAs between surrogate c1 to c5 samples and suborgan-specific from Nohata et al. (ref [20]). Table S7. Protein-coding genes correlated with surrogate lncRNAs per sample cluster. (XLSX 125 kb)

从癌症基因组图谱（TCGA, The Cancer Genome Atlas）的426个头颈鳞状细胞癌（HNSCC, Head and Neck Squamous Cell Carcinoma）样本中筛选得到的表达差异最显著的500个长链非编码RNA（lncRNA）基因。
表S2：基于lncRNA的TCGA头颈鳞状细胞癌样本聚类结果。
表S3：各样本聚类对应的替代lncRNA基因。
表S4：替代聚类c5与Nohata等（参考文献[20]）研究中TP53野生型（TP53 WT）感染样本内高表达基因的共有lncRNA。
表S5：替代聚类c5与Nohata等（参考文献[20]）研究中人乳头瘤病毒（HPV, Human Papillomavirus）感染样本内高表达基因的共有lncRNA。
表S6：替代聚类c1至c5样本与Nohata等（参考文献[20]）研究中器官亚特异性相关基因的共有lncRNA。
表S7：各样本聚类中与替代lncRNA存在相关性的蛋白编码基因。（XLSX格式，大小125 KB）