Additional file 4: Figure S2. of Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae)

Phylogenomics of Daucus from a maximum likelihood analysis using 164 accessions and 38,920 SNPs (30Â % missing imputed genotypes) obtained by GBS. Numbers above branches represent bootstrap values, with only values higher than 70Â % shown. Names given to clades refer to the geographic origin and improvement status of the accessions of the D. carota complex. Clades A and B corresponds to the two main groups of the Daucus phylogeny. (PDF 1 MB)

针对胡萝卜属（Daucus）的系统发育基因组学研究，采用最大似然法对164份种质材料及38920个单核苷酸多态性（Single Nucleotide Polymorphism, SNPs）位点展开分析，上述位点由基因组简化测序（Genotyping-by-Sequencing, GBS）获得，缺失基因型的插补比例为30%。分支上方的数值为自举支持值，仅展示大于70%的结果。进化枝的命名依据胡萝卜（Daucus carota）复合群种质的地理起源与改良状态。进化枝A与B对应胡萝卜属系统发育树的两个主要类群。（PDF文件，大小1 MB）