Transcriptomics of Alveolar Immune Cells Reveals Insight into Mechanisms of Human Pulmonary Fibrosis

This repository contains the preprocessed single-cell RNA data from the manuscript Transcriptomics of Alveolar Immune Cells Reveals Insight into Mechanisms of Human Pulmonary Fibrosis (under submission). Data Descriptions: BAL_FINAL.rds Seurat Object with the entire dataset BAL_FINAL.h5ad Scanpy Object with the entire dataset BAL_FINAL_metadata.txt Metadata for each cell mlm_umap_embeddings.csv UMAP embeddings for the monocyte-derived clusters ipf_allen2022.full_score.gz scDRS results for each cell using the Richard Allen et al. 2022 IPF GWAS summary statistics