SPAdes whole genome scaffolds assembled from Greenlandic Alaria esculenta (TTB000062)

Whole genome data was generated from a kelp specimen Alaria esculenta. Reads were assembled using SPAdes. Scaffolds from SPAdes assembly were further filtered for plastid sequences using BLAST+. Alignments used in hyphy analyses are also included. Alignments are by gene, with concatenated alignments based on functional group. Concatenated gene alignments were masked using Gblocks.

本数据集的全基因组数据取自翅藻（Alaria esculenta）标本。测序读段通过SPAdes完成组装。SPAdes组装得到的基因组支架序列进一步通过BLAST+工具筛选质体序列。本数据集同时包含用于HyPhy分析的序列比对结果，此类比对按基因进行划分，同时包含基于功能组构建的串联比对序列。串联基因比对序列经Gblocks完成了序列屏蔽处理。