zmh-Supplementary tables.xlsx

<strong>Table S1.</strong> Summary statistics of the 16S rRNA gene sequencing results in the ileum. <strong>Table S2.</strong> Summary statistics of the 16S rRNA gene sequencing results in the cecum. <strong>Table S3. </strong>Topological properties of co-occurrence networks in cecal microbial communities of the HBW chickens. <strong>Table S4. </strong>Topological properties of co-occurrence networks in cecal microbial communities of the LBW chickens. <strong>Table S5.</strong> Topological properties of co-occurrence networks in cecal microbial communities between the HBW and LBW chickens. <strong>Table S6. </strong>Significantly changed metabolites (SCMs) between the HBW and LBW chickens. <strong>Table S7. </strong>KEGG enrichment analysis between the HBW and LBW chickens. <strong>Table S8.</strong> Summary statistics of the RNA sequencing results in the cecum. <strong>Table S9.</strong> Differentially expressed genes (DEGs) between the HBW and LBW chickens. <strong>Table S10.</strong> GO enrichment analysis of DEGs between the HBW and LBW chickens. <strong>Table S11.</strong> KEGG enrichment analysis of DEGs between the HBW and LBW chickens. <strong>Table S12. </strong>GO enrichment analysis in cluster Ⅰ of DEGs. <strong>Table S13. </strong>GO enrichment analysis in cluster Ⅱ of DEGs. <strong>Table S14.</strong> GO enrichment analysis in cluster Ⅲ of DEGs. <strong>Table S15.</strong> GO enrichment analysis in cluster Ⅳ of DEGs. <strong>Table S16. </strong>Information of bacterial isolates from the HBW chicken gut. <strong>Table S17. </strong>The whole-genome sequencing information of four strains. <strong>Table S18.</strong> Topological properties of co-occurrence networks in cecal microbial communities between the CON and CML393+CML396 chickens. <strong>Table S19. </strong>SCMs between the CON and CML393+CML396 chickens. <strong>Table S20. </strong>DEGs between the CON and CML393+CML396 chickens. <strong>Table S21.</strong> KEGG enrichedment analysis of DEGs between the CON and CML393+CML396 chickens. <strong>Table S22.</strong> List of primer sequence for RT-qPCR analysis.

<strong>表S1.</strong> 回肠16S rRNA基因测序结果汇总统计。<strong>表S2.</strong> 盲肠16S rRNA基因测序结果汇总统计。<strong>表S3.</strong> 高体重（High Body Weight, HBW）鸡盲肠微生物群落共现网络的拓扑特性。<strong>表S4.</strong> 低体重（Low Body Weight, LBW）鸡盲肠微生物群落共现网络的拓扑特性。<strong>表S5.</strong> HBW与LBW鸡盲肠微生物群落共现网络的拓扑特性。<strong>表S6.</strong> HBW与LBW鸡间显著差异代谢物（Significantly Changed Metabolites, SCMs）。<strong>表S7.</strong> HBW与LBW鸡间京都基因与基因组百科全书（Kyoto Encyclopedia of Genes and Genomes, KEGG）富集分析。<strong>表S8.</strong> 盲肠RNA测序结果汇总统计。<strong>表S9.</strong> HBW与LBW鸡间差异表达基因（Differentially Expressed Genes, DEGs）。<strong>表S10.</strong> HBW与LBW鸡间差异表达基因的基因本体（Gene Ontology, GO）富集分析。<strong>表S11.</strong> HBW与LBW鸡间差异表达基因的京都基因与基因组百科全书（Kyoto Encyclopedia of Genes and Genomes, KEGG）富集分析。<strong>表S12.</strong> 差异表达基因聚类簇Ⅰ的基因本体（Gene Ontology, GO）富集分析。<strong>表S13.</strong> 差异表达基因聚类簇Ⅱ的基因本体（Gene Ontology, GO）富集分析。<strong>表S14.</strong> 差异表达基因聚类簇Ⅲ的基因本体（Gene Ontology, GO）富集分析。<strong>表S15.</strong> 差异表达基因聚类簇Ⅳ的基因本体（Gene Ontology, GO）富集分析。<strong>表S16.</strong> HBW鸡肠道分离菌株信息。<strong>表S17.</strong> 4株菌株的全基因组测序信息。<strong>表S18.</strong> 对照组（Control, CON）与CML393+CML396鸡盲肠微生物群落共现网络的拓扑特性。<strong>表S19.</strong> CON与CML393+CML396鸡间显著差异代谢物（SCMs）。<strong>表S20.</strong> CON与CML393+CML396鸡间差异表达基因（DEGs）。<strong>表S21.</strong> CON与CML393+CML396鸡间差异表达基因的京都基因与基因组百科全书（Kyoto Encyclopedia of Genes and Genomes, KEGG）富集分析。<strong>表S22.</strong> 实时定量逆转录聚合酶链反应（Reverse Transcription Quantitative Polymerase Chain Reaction, RT-qPCR）分析用引物序列列表。