Additional file 1 of In vitro and in silico parameters for precise cgMLST typing of Listeria monocytogenes
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_In_vitro_and_in_silico_parameters_for_precise_cgMLST_typing_of_Listeria_monocytogenes/19445110
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Additional file 1 Read depth (X) and breadth (%) coverages estimated with BBMap (version February 13, 2020) or INNUca (version 4.2.2) of Listeria monocytogenes paired-end reads from reference genomes ATCC19114, ATCC19115 and ATCCBAA679 (n = 420) downsampled at different targeted read (Dr: 10X, 20X, 30X, 40X, 50X, 60X, 70X, 80X, 90X and 100X) and kmer (Dk: 8X, 15X, 23X, 30X, 38X, 45X, 52X, 60X, 67X, 75X) depth (X) with BBNorm (read length R = 150 and kmer size K = 30). (TSV 65 kb)
提供机构：
Moura, Alexandra; Palma, Federica; Di Pasquale, Adriano; Chiaverini, Alexandra; Garofolo, Giuliano; Brisse, Sylvain; Radomski, Nicolas; Criscuolo, Alexis; Cammà, Cesare; Janowicz, Anna; Mangone, Iolanda; Torresi, Marina
创建时间：
2022-03-29
