Test for relationship between recombination rate and diversity and divergence for sites in intergenic regions.

Two generalized linear mixed models with binomial distribution. Region (6 Mb, 17 Mb, 21 Mb) was included as a random effect to account for including multiple intervals per region. This analysis only included 20 kb regions. An asterisk indicates significance at α = 0.05. For this analysis, the ‘neutral mutation rate’ was set as the average pairwise D. lowei-D. persimilis divergence for sites in intergenic regions.