Additional file 4 of Contribution of genetic and epigenetic changes to escape from X-chromosome inactivation

Additional file4: Table S4. All XCI status calls made here. See additional files. The first sheet contains a single XCI status call per gene per method. Published calls are from Balaton, et al. 2015. Other sheets contain all calls per sample for each method. Each row is one entry into the model, so Xi/Xa is per gene and the others are for unique transcripts. For DNAme, the samples on the far right in shades of grey are males while the samples on the left in color are females. For the epigenetic predictor, separate low confidence categories were made for when transcripts have only 12-14 of the 20 models per sample predicted a certain XCI status. Start and stop locations are from hg38.

附加文件4：表S4。本研究中所有X染色体失活（X-chromosome inactivation, XCI）状态判定结果。详见附加文件。首个工作表包含每种方法下每个基因的单条XCI状态判定结果；已发表的判定结果源自Balaton等人2015年的研究。其余工作表则包含每种方法下每个样本的全部判定结果。每一行对应模型中的一个条目，因此Xi/Xa项按基因划分，其余条目对应唯一转录本。对于DNA甲基化（DNA methylation, DNAme）数据，最右侧以灰度显示的样本为男性个体，左侧以彩色显示的样本为女性个体。针对表观遗传预测器，当每个样本的20个模型中仅有12~14个预测出某一XCI状态时，会为对应转录本单独设立低置信度分类。起始与终止位点均参考hg38基因组版本。