Additional file 2 of Long-read sequencing and genome assembly of natural history collection samples and challenging specimens

Additional file 2: Table S1: Detailed list of species and samples, together with DNA extraction and long-read sequencing results of each SMRT cell. Table S2: Assembly statistics for Cathorops nuchalis and Cathorops wayuu. Table S3: High levels of contamination in samples of Russian desman, Hazel dormouse and slow worm. Table S4: Bradypus torquatus genome assemblies generated with data from ultra-low input libraries prepared with polymerases A/B and/or C at different coverages. Table S5: Genome assemblies generated with polymerases A/B and/or C data at different coverages for Elyisa timida, Scintilla philippinensis, and Podura aquatica. Table S6: Assembly statistics for all tested contig assemblers using sequenced PacBio HiFi reads from four SMRTs produced with polymerase A/B and one SMRT produced with polymerase C for Bradypus torquatus.

补充文件2：
表S1：物种与样本详细列表，以及每个SMRT细胞的DNA提取和长读长测序结果。
表S2：项鳍海鲶（Cathorops nuchalis）与瓦尤海鲶（Cathorops wayuu）的基因组组装统计数据。
表S3：俄罗斯麝鼹、榛睡鼠及慢缺肢蜥样本的高污染水平。
表S4：鬃三趾树懒（Bradypus torquatus）的基因组组装结果，其测序数据来自使用聚合酶A/B和/或C制备的超低起始量文库，且覆盖度各不相同。
表S5：针对伊氏钝绥螺（Elyisa timida）、菲律宾闪光螺（Scintilla philippinensis）与水跳虫（Podura aquatica），采用聚合酶A/B和/或C的测序数据、设置不同覆盖度所生成的基因组组装结果。
表S6：针对鬃三趾树懒（Bradypus torquatus），利用4个经聚合酶A/B制备的SMRT细胞与1个经聚合酶C制备的SMRT细胞产出的PacBio HiFi测序读段（PacBio HiFi reads），对所有测试过的重叠群组装工具进行组装后的统计数据。