Synthetic Spike-In sequencing using R2C2

NIAID Data Ecosystem2026-05-25 收录

测序方法基准测试

R2C2技术评估

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP136889 数据链接链接失效反馈

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资源简介：

We benchmarked our R2C2 method by sequencing synthetic RNA molecules present in the Lexogen SIRV E2 mix

创建时间：

2018-06-12

Comparison of Linked-Read Sequencing Methods on Metagenomic Mock Communities

宏基因组学方法评估

测序方法基准测试

While 10x Genomics' linked reads has been discontinued after nearly half a decade of widespread usage, a variety of other barcode-based SSLR methods such as LoopSeq and TELL-Seq have been commercializ

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A comprehensive benchmarking study of SARS-CoV-2 whole-genome sequencing using multiple library construction protocols and patient samples

SARS-CoV-2基因组分析

测序方法基准测试

We sequenced 48 WGS libraries from six protocols for which each was started in three different viral inputs, two sample storage conditions and two sequencng platforms.

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Reads of the iMESS simulated metagenomic datasets

宏基因组学模拟数据

测序方法基准测试

Reads of the iMESS simulated metagenomic datasets

Zenodo2022-05-25 更新10

Benchmarking bulk and single-cell variant calling approaches on Chromium scRNA-seq and scATAC-seq libraries. Benchmarking bulk and single-cell variant calling approaches on Chromium scRNA-seq and scATAC-seq libraries

单细胞变异检测

测序方法基准测试

Single-cell sequencing methodologies such as scRNA-seq and scATAC-seq have become widespread and effective tools to interrogate tissue composition. Increasingly, variant callers are being applied to t

NIAID Data Ecosystem30

Additional file 5 of Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation

替代性多聚腺苷酸化

测序方法基准测试

Additional file 5: DaPars2.PAS.sites. DaPars2 PAS sites with PAU > 5% (BED format).

NIAID Data Ecosystem20