Additional file 1: of Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops

Table S1. RNAseq Libraries. Summary statistics of Brachypodium RNAseq libraries. Table S2. BDI Prominence Lvls. miRNA target prediction scores and prominence data for predicted Brachypodium miRNA targets. Table S3. SWI miRNAs. Genomic location, folding data, and sequences of conserved miRNAs found in switchgrass. Table S4. SWI Prominence Lvls. miRNA target prediction scores and prominence data for predicted switchgrass miRNA targets. Table S5. SBI Prominence Lvls. miRNA target prediction scores and prominence data for predicted sorghum miRNA targets. Table S6. Inverse and Unchanged. miRNA target prediction scores, annotation information, PARE data, and RNAseq data for all miRNAs/mRNA-targets in the “Inverse” and “Unchanged” groups. Table S7. Primers and Oligos. Primers and oligos used in this study. (XLSX 1498 kb)

表S1 RNA测序文库（RNAseq）：短柄草属（Brachypodium）RNA测序文库的统计汇总信息。
表S2 BDI 显著性等级：短柄草属预测microRNA（miRNA）靶标的miRNA靶标预测得分与显著性数据。
表S3 柳枝稷保守miRNA：柳枝稷（switchgrass）中发现的保守miRNA的基因组位置、折叠结构数据与序列信息。
表S4 SWI 显著性等级：柳枝稷预测miRNA靶标的miRNA靶标预测得分与显著性数据。
表S5 SBI 显著性等级：高粱（sorghum）预测miRNA靶标的miRNA靶标预测得分与显著性数据。
表S6 反向表达与无变化组："反向表达"与"无变化"组中所有miRNA/mRNA靶标的miRNA靶标预测得分、注释信息、PARE数据与RNA测序（RNAseq）数据。
表S7 引物与寡核苷酸：本研究中使用的引物与寡核苷酸。
（XLSX格式，文件大小1498 KB）