Estimating recent and historical effective population size of marine and freshwater sticklebacks

Genetic data, code, and scripts used in the manuscript: X. Feng, A. Löytynoja, J. Merilä; Estimating recent and historical effective population size of marine and freshwater sticklebacks The zipped file sticklebackne_data&script.zip contains the input data and output files for each of the analyses, organized into separate folders. Filtered autosomal data in VCF format are located in the filtered_positive_mask_vcf folder. Details of the filtering criteria are provided in the manuscript. Scripts and code used can be found in Rscript.txt unix_scripts.txt