Supplementary Table S4 and S5 for manuscript "Evolutionary rates of bumblebee genomes are faster at lower elevations"

Concatenated orthologous sequences of 14 bumblebees species (<i>Bombus</i> spp.). Bumblebees (12 species) were sequenced with both directions of 150 bp reads representing approximately 100×coverage of the genome. The clean reads were used for de novo assembly with IDBA-UD. Previously published genomes of <i>B. terrestris</i> (RefSeq assembly accession: GCF_000214255.1) and <i>B. impatiens</i> (RefSeq assembly accession: GCF_000188095.2) were also used. The coding sequence of the longest exon of each nuclear gene (CDS-L) was extracted. The orthologous CDS-L sequences among the 14 species were identified and aligned. All the nuclear sequences (CDS-L) were concatenated into the NUC file (Supplementary_Table_S4(NUC).txt, in fasta format). The 13 coding genes in the mitochondrial genome were extracted and aligned manually. All the mitochondrial sequences were concatenated into the MIT file with fasta format (Supplementary_Table_S5(MIT).txt, in fasta format).