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SFF and Mapping files for demultiplexing

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Figshare2019-09-16 更新2026-04-08 收录
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Original standard flowgram format (sff) files and mapping files for demultiplexing The provided mapping files contain the barcode and linker primer sequences that were used for sample-wise indexing in 454 pyrosequencing. This information was used to demultiplex the raw pooled sequencing data (provided here as .sff files) into the FASTQ-format files for each sample that are available through the European Nucleotide Archive (ENA) at the European Bioinformatics Institute (EBI) under accession number PRJEB25221.<br><br> <b>Reference</b> <b>Ingham AC, Kielsen K, Cilieborg MS, Lund O, Holmes S, Aarestrup FM, Müller KG, and Pamp SJ. (2019) </b>Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation. Microbiome 7:131 https://doi.org/10.1186/s40168-019-0745-z
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2018-10-20
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