Additional file 2 of The mitochondrial genome of the diploid oat Avena longiglumis
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Additional file 2: Table S1. Species and GenBank accessions used for phylogenetic analysis. Table S2. Characteristics of unitigs assembled by Unicycler. Table S3. Annotated genes and their locations. Table S4. SSRs identified in the mitochondrial genome of A. longiglumis. Table S5. Tandem repeat sequences identified in the mitochondrial genome of A. longiglumis. Table S6. Duplicated repeats (≥ 30 bp) identified in the mitochondrial genome of A. longiglumis. Table S7. The homologous DNA fragment identified among the mitochondrial genome and plastome of A. longiglumis. Table S8. The blastn results among the mitogenome (Query) and nuclear genome (Subject) of A. longiglumis. Table S9. RNA editing events identified in the mitochondrial protein coding gense of A. longiglumis. Table S10. tRNA genes identified in the mitochondrial genome of 29 Poaceae accessions.
附加文件2:表S1。用于系统发育分析的物种及基因银行(GenBank)登录号。表S2。由Unicycler组装得到的单位重叠群(unitigs)的特征信息。表S3。注释后的基因及其所在位置。表S4。长颖燕麦(A. longiglumis)线粒体基因组中鉴定得到的简单序列重复(SSR)。表S5。长颖燕麦线粒体基因组中鉴定得到的串联重复序列。表S6。长颖燕麦线粒体基因组中鉴定得到的长度≥30 bp的重复序列。表S7。长颖燕麦线粒体基因组与质体基因组之间鉴定得到的同源DNA片段。表S8。长颖燕麦线粒体基因组(查询序列(Query))与核基因组(Subject)之间的blastn比对结果。表S9。长颖燕麦线粒体蛋白编码基因中鉴定得到的RNA编辑事件。表S10。29份禾本科(Poaceae)材料线粒体基因组中鉴定得到的转运RNA(tRNA)基因。
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figshare
创建时间:
2023-04-26



