OTU table, lefse result and ARGs abundance data.
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下载链接：
https://zenodo.org/record/11497490
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资源简介：
Table_otu.raw.txt.xls: OTU table processed by Uparse(97% similarity) on the Magigene Cloud Platform. Chloroplasts, mitochondria, Unclassified, archaea otus were removed.
rpkm.type.txt: Abundance of Antibiotic-resistant genes (ARGs) grouped by types processed by ARGs-OAP v3.0
rpkm.subtype.txt: ARGs grouped by subtypes processed by ARGs-OAP v3.0
rpkm.genes.txt: ARGs grouped by genes processed by ARGs-OAP v3.0
lefse_results.txt.xls: lefse analysis result produced by Magigene Cloud Platform.
otus.fa: Representative otu sequences processed by Uparse(97% similarity) on the Magigene Cloud Platform. Chloroplasts, mitochondria, Unclassified, archaea otus were removed.
otus_aligned.fasta: Aligned otu sequences by mafft.
Bash: mafft otus.fa > otus_aligned.fa
otus_fasttree.tre: Construct phylogenic tree from otus_aligned.fa by fasttree.
创建时间：
2024-06-06
