NCB-A50345-T_Sequencing and mass spectrum raw data_Chen et al.
收藏DataCite Commons2023-04-19 更新2024-08-18 收录
下载链接:
https://figshare.com/articles/dataset/NCB-A50345-T_Sequencing_and_mass_spectrum_raw_data_Chen_et_al_/22066136
下载链接
链接失效反馈官方服务:
资源简介:
Sequencing data: Next-generation sequencing data is from the PARPi resistance CRISPR screen describing in this paper, by analyzing the sgRNA abundance of GeCKO v2 CRISPR knockout libraries A and B at the indicated time points in the cells before and after olaparib treatment. Including <strong>library-A-0d</strong> / <strong>library-B-0d</strong> / <strong>library-A-30d</strong> / <strong>library-B-30d and a MD5 file.</strong> <br> Mass spectrum data: For mass spectrometry, on-bead trypsin digestion was performed and liquid chromatography-tandem MS (LC-MS/MS) was carried out on the Thermo Q Exactive Hybrid quadrupole orbitrap mass spectrometer as described in this paper. Including <strong>BioID-NLS-1</strong> / <strong>BioID-NLS-2 /</strong> <strong>BioID-NUMEN / NUMEN-BioID.</strong>
测序数据:本研究所述的聚ADP核糖聚合酶抑制剂(Poly(ADP-ribose) polymerase inhibitor, PARPi)耐药CRISPR筛选的二代测序(Next-generation sequencing)数据,通过分析经奥拉帕尼(olaparib)处理前后的细胞中GeCKO v2 CRISPR敲除文库A与B的单引导RNA(single guide RNA, sgRNA)在指定时间点的丰度得到。数据集包含<strong>library-A-0d</strong> / <strong>library-B-0d</strong> / <strong>library-A-30d</strong> / <strong>library-B-30d 及一份MD5校验文件</strong>。
质谱数据:质谱检测采用磁珠上胰蛋白酶消化法,并按照本研究所述方法,在赛默飞Q Exactive混合型四极杆轨道阱质谱仪(Thermo Q Exactive Hybrid quadrupole orbitrap mass spectrometer)上完成液相色谱-串联质谱(LC-MS/MS)分析。数据集包含<strong>BioID-NLS-1</strong> / <strong>BioID-NLS-2</strong> / <strong>BioID-NUMEN</strong> / <strong>NUMEN-BioID</strong>。
提供机构:
figshare
创建时间:
2023-02-10



