Fungal amplicon sequencing data from rhizosphere soil associated with Spartian alterniflora collected in Bay Jimmy, Louisiana from 2013-01-19 to 2013-06-26
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资源简介:
This dataset contains fungal amplicon sequencing data from rhizosphere soil associated with Spartina alterniflora plants using ITS1 markers, respectively. The dataset was in support of the study assessing the influence of S. alterniflora plant traits on associated soil microbial communities, which was conducted along Bay Jimmy, Louisiana in 2013. The table is the raw (non-rarified) fungal OTU abundances table generated from the soil surrounding each plant. Fungal response variables are the abundance, diversity and composition in rhizosphere soil using culture-independent sequencing of ITS region for taxonomy; and high throughput sequencing for community analyses. Environmental parameters including location, residual oil, individual GPS points etc. measured from the individual plant as well as biotic parameters such as plant provenance are also included.
本数据集包含以ITS1为标记基因,获取自互花米草(Spartina alterniflora)关联根际土壤的真菌扩增子测序数据。本数据集用于支撑2013年在路易斯安那州Bay Jimmy开展的一项研究,该研究旨在评估互花米草植株性状对其关联土壤微生物群落的影响。本表格为从每株植物周边土壤中生成的原始(未经过稀疏化处理)真菌操作分类单元(Operational Taxonomic Unit,OTU)丰度表。真菌响应变量包括:通过ITS区域非培养依赖型测序完成分类学鉴定得到的根际土壤真菌丰度、多样性与群落组成,以及用于群落分析的高通量测序数据。数据集同时包含从单株植物采集得到的各类环境参数(如采样点位、残留石油含量、单个GPS坐标等),以及诸如植物起源地等生物参数。
创建时间:
2020-02-28



