Supporting data for “Computational analysis of shotgun metagenomic data from human gut microbiota”.

This dataset contains raw source data and scripts written to generate figures for the thesis entitled "Supporting data for “Computational analysis of shotgun metagenomic data from human gut microbiota". This includes raw species abundance tables used for statistical analysis and methods evaluation, clinical patient records and blood/stool biochemical measurements. Files are separated by their chapter contribution. Chapter 2 files are related to methods comparison and evaluation in gut metagenomics species abundance estimation. Chapter 3 primarily contains raw patient clinical data and their gut microbial compositions for statistical analysis. Chapter 4 contains files related to the scripts utilized to investigate the phenomenon of read coverage bias in human gut metagenomic data.

本数据集包含为论文《人体肠道菌群鸟枪法宏基因组（shotgun metagenomic）数据的计算分析》编写的原始源数据与绘图脚本，同时涵盖用于统计分析与方法评估的物种丰度原始表、临床患者记录以及血液与粪便生化检测指标。所有文件按其对应论文章节的贡献进行分类归档：第2章文件聚焦于肠道宏基因组物种丰度估算领域的方法对比与评估工作；第3章主要收录用于统计分析的患者临床原始数据与肠道微生物组构成信息；第4章包含用于探究人体肠道宏基因组数据中读段覆盖偏倚现象的脚本文件。