Additional file 9: of Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction

Gene expression levels for genes corresponding to proteins listed in Fig. 5. The table represents expression values of genes, corresponding to proteins listed in Fig. 5. Data for cv. Désirée (NT) and NahG-Désirée (NahG) plants are shown. Potato genome sequencing consortium (PGSC) protein identifiers [80] and ITAG potato annotations were linked to Potato Oligo Chip Initiative (POCI) identifiers [64] for comparisons between protein and gene expression obtained with microarrays. As different POCI sequences can represent the same gene, allelic variants or closely related gene family multiple hits were often retrieved for single proteins in this database. Protein expression is thus linked to multiple results of microarray analysis. On the other hand it is also possible that some of the proteins no corresponding microarray probe have been identified. (XLSX 17 kb)

本数据集收录了图5中所列蛋白质对应基因的表达水平。本表展示了与图5所列蛋白质相对应的基因表达量数值。本次呈现了栽培品种迪西蕾（cv. Désirée，NT）与NahG-迪西蕾（NahG）植株的相关实验数据。本研究将马铃薯基因组测序联盟（Potato Genome Sequencing Consortium, PGSC）的蛋白质标识符[80]与ITAG马铃薯注释信息，关联至马铃薯寡核苷酸芯片计划（Potato Oligo Chip Initiative, POCI）标识符[64]，以实现通过微阵列检测得到的蛋白质表达与基因表达数据的对比分析。由于不同的POCI序列可对应同一基因、等位变异体或亲缘关系较近的基因家族，因此在该数据库中，单个蛋白质往往会检索到多个匹配结果。由此，蛋白质表达数据会对应多个微阵列分析结果。另一方面，部分蛋白质可能未被检测到对应的微阵列探针。（XLSX格式，文件大小17 KB）