Reciprocal Best Structure Hits
收藏DataCite Commons2024-12-17 更新2024-08-25 收录
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https://www.repository.cam.ac.uk/handle/1810/338081
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资源简介：
In this work, we are using AlphaFold structure models to find the closest homologues proteins between Homo sapiens and D. melanogaster, C. elegans, S. cerevisiae and S. pombe as well as between S. cerevisiae and S. pombe. We are using the structure aligner Foldseek to run all against all and search for the best scoring hit in both directions to detect the Reciprocal Best Structure Hits (RBSH). We compare the results to protein pairs detected by their sequence similarity as Reciprocal Best Hits (RBH) and verify the results using the PANTHER family classification files. $$ \ $$ Note: This dataset is an earlier version of a more up-to-date dataset at https://doi.org/10.17863/CAM.87873
提供机构：
Apollo - University of Cambridge Repository
创建时间：
2022-06-14
