MOESM1 of Full moonlight-induced circadian clock entrainment in Coffea arabica

Additional file 1: Table S0. REPLICATES. Table S1. Genes differentially expressed between Full moon and new Moon at ZT0. Table S2. Genes differentially expressed between Full moon and new Moon at ZT3. Table S3. Genes differentially expressed between Full moon and new Moon at ZT6. Table S4. Genes differentially expressed between Full moon and new Moon at ZT9. Table S5. Genes differentially expressed between Full moon and new Moon at ZT12. Table S6. Genes differentially expressed between Full moon and new Moon at ZT15. Table S7. Genes differentially expressed between Full moon and new Moon at ZT18. Table S8. Genes differentially expressed between Full moon and new Moon at ZT21. Table S9. Genes differentially expressed between Full moon and new Moon at ZT24. Figure S10. Rhythmic genes in common between Coffee and Arabidopsis thaliana. Figure S11. Pairwise phase plots of the core clock genes. Figure S12. Number of genes per phase under new moon and the full moon. Table S13. Correlation matrix between Redox homeostasis genes and LHY. Table S14. Correlation matrix between genes involved in lipids pathways and LHY. Table S14. Primers used for genes studied by qRT-PCR. Figure S16. RT-QPCR of LHY gene during new moon. Figure S17. RT-QPCR time-course of core clock genes, POR1A and GWD1.

附加文件1：表S0。重复实验。
表S1：ZT0时刻满月与新月间的差异表达基因。
表S2：ZT3时刻满月与新月间的差异表达基因。
表S3：ZT6时刻满月与新月间的差异表达基因。
表S4：ZT9时刻满月与新月间的差异表达基因。
表S5：ZT12时刻满月与新月间的差异表达基因。
表S6：ZT15时刻满月与新月间的差异表达基因。
表S7：ZT18时刻满月与新月间的差异表达基因。
表S8：ZT21时刻满月与新月间的差异表达基因。
表S9：ZT24时刻满月与新月间的差异表达基因。
图S10：咖啡与拟南芥（Arabidopsis thaliana）共有的节律基因。
图S11：核心时钟基因的成对相位图。
图S12：新月与满月条件下各相位的基因数量。
表S13：氧化还原稳态（Redox homeostasis）基因与LHY的相关矩阵。
表S14：脂类通路（lipids pathways）相关基因与LHY的相关矩阵。
表S14：qRT-PCR研究所用基因的扩增引物序列。
图S16：新月条件下LHY基因的RT-QPCR检测结果。
图S17：核心时钟基因、POR1A及GWD1的RT-QPCR时间进程图谱。