Additional file 4 of Quantifying steric hindrance and topological obstruction to protein structure superposition

Additional file 4. Data from aligning CATH2.4 domains. NeamTM3to20NoEndContraction.mat Data from global RMSD and TM-align alignments of alpha carbon backbone curves. The maximal length of Reidemeister moves is varied from 3 to 20 and end-contractions are not allowed. Similar data for the smooth representation of the backbone curve are contained in NeamTMSmooth3to20NoEndContraction.mat and in NeamTMSmooth3to20EndContraction.matwhen allowing end-contractions of MaxLength = 2/residues.

附加文件4：CATH2.4结构域比对相关数据。文件NeamTM3to20NoEndContraction.mat包含α碳主链曲线的全局均方根偏差（Root Mean Square Deviation, RMSD）与TM-align比对数据，其中赖德迈斯特移动（Reidemeister move）的最大长度取值范围为3至20，且不允许末端收缩操作。针对主链曲线平滑表示形式的同类比对数据，分别收录于NeamTMSmooth3to20NoEndContraction.mat与NeamTMSmooth3to20EndContraction.mat中，后者允许执行末端收缩操作，且收缩最大长度为2/残基。