Metadata and Recombinant Candidate Identification in nsp12 Region of 1,407 SARS-CoV-2 Genomes (Early 2025)

This dataset includes aligned sequence IDs and metadata for 1,407 SARS-CoV-2 genomes , focusing on the nsp12 (RdRp) coding region , collected globally during early 2025. Using Nextclade , I identified 7 potential recombinant sequences within this dataset. This metadata file provides sequence identifiers used in downstream analysis and can be used for tracking, filtering, or re-analysis of the nsp12 region.
Sequences are primarily assigned to lineage BA.2.86 . Files can also be requested for other non-structural proteins (nsp7, nsp8, nsp14), with related analyses available under separate DOIs.