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cydrasil-v2-reference-alignment.phy

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DataCite Commons2020-11-12 更新2024-07-28 收录
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https://figshare.com/articles/dataset/cydrasil-v2-reference-alignment_phy/13159307
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This is a curated alignment generated using SSU-Align 0.1.1 with default parameters and masked using the ssu-mask feature of SSU-Align with per-alignment calculated masks. The alignment was then manually examined in Geneious version 8 to remove duplicate aligned sequences, non-16S rRNA sequences, and alignment errors. Sequences that were poorly aligned (typically due to the unlabeled inclusion of the ITS and/or 23S regions) were trimmed and removed if their length fell below the 1100 base pair threshold. The alignment was generated using the FASTA file cydrasil-v2-reference-sequence-list.fasta found within the Cydrasil 2.0 figshare project. This alignment file is in phylip format. <br>
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figshare
创建时间:
2020-11-12
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