Supplemental tables from Identification of Interacting Stromal Axes in Triple-Negative Breast Cancer

Supplemental Table 1: TNBCType calls match between ROI95 and the online webtool Supplemental Table 2: Summary of patient characteristics for LCM cohort Supplemental table 3: List of differentially expressed genes for each axis Supplemental Table 4: Representative pathways and genes used to label the stromal axes Supplemental Table 5: Agreement between classifications in LCM dataset and matched bulk expression profiles. Supplemental Table 6: Observed frequencies of the states for each stromal axis score across the whole cohort of TNBC patients (n=1,098). Supplemental Table 7: Enrichment and depletion of some stromal subtypes List of all stromal axis score-baed assignments as well as values entered for binomial test and resultant p-value