Qtl Script And Vcf Files - Genetic Architecture Of Flowering-Time Variation In Brachypodium Distachyon

Supplemental data for the article: GENETIC ARCHITECTURE OF FLOWERING-TIME VARIATION IN BRACHYPODIUM DISTACHYON (Woods et al., 2016). Supplemental data includes: A folder named “Data”, which contains: <strong>Raw genotypic data</strong>. Data showing the parental genotype in a RIL population (F7; Bd21 X Bd1-1) <strong>Raw phenotypic data</strong>. Flowering time (leaves and days to flowering) of the RIL population in different growth environments. <strong>The genetic map </strong>(see material and methods section of Woods et al., 2016 for additional information). <strong>Gene positions.</strong> A file containing the position of annotated genes on the Brachypodium distachyon genome V2.1. Data from Phytozome (https://phytozome.jgi.doe.gov/pz/portal.html). The<strong> R script</strong> used for the QTL analysis (Final_script.R). <strong>VCF files of the loci of interest</strong>. A folder called “VCF” includes the VCF files of the genes presented in Fig. 6 (VRN1, PHYC, VRN2, and FD).